miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|190289832|gb|FG762539.1|FG762539 GACTCTAATGCGGATCCAGACGGGCAGGTTGTCAGTGCGGATTATATTCCCAGTGGAGAGTAATAGAGGTCTGCACCTGC
TGGTCACCATGAGGAATATGGGGATCTTCCAGCTCATGATGAAGAAGAAAGAACTTATTCCTCTGATTGCATTTGTCTCC
TTTGCTGGAATAGGAGCAACGCTGGCGAGTCTCAATGCTATGAGAAAATCTGATGTGATTTTTAACAAGACTGGCAACCC
AGAACCATGGGAACATGTGAACCCTACCCAACCCCAAAAGCTGATAACAATCAACCAGGAATGGAAGCCCATAGAAGAGC
TGGAGAAAGTCAAAAAAATGATGAAGTGATGGGTGCCTGCCTCTTCACGTGACACTCTATGAATCTAGTGGAATCACTTC
CGCACAAACTAGATGAATGAAACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGGTCTCCCTCCAGCTTTTTTGGAC
TTTAGACATTACAGTTTGTTTTTTCAGAAGTTTCCCTGCATACATCCCCCAAAGTCCAAAATAACGGGGATTTGCTTGCA
CTTAGAACAGCCATGTGTTGCCTTGAAGAAAAGATGTTCAGCGTTCTCTGCATTCTTGAAGTATATATAAAGGCCTTTAT
CCATTTGTGAGCCCTTAAAGAGATGAACTAATTTTGTCTGAGGTATCCTGTAGCCTTATGTTTTCTAT




Most similar to sp|Q810Q5|NMES1_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q810Q5|NMES1_MOUSE Normal mucosa of esophagus-specific gene 1
           protein OS=Mus musculus GN=Nmes1 PE=2 SV=1
          Length = 83

 Score =  108 bits (271), Expect = 3e-23
 Identities = 48/76 (63%), Positives = 63/76 (82%)
 Frame = +2

Query: 98  MGIFQLMMKKKELIPLIAFVSFAGIGATLASLNAMRKSDVIFNKTGNPEPWEHVNPTQPQ 277
           MG+FQ++MK KELIPL  F+S A  GAT  +L A++K+DV+ ++  NPEPWE V+PTQPQ
Sbjct: 1   MGVFQILMKNKELIPLAFFISVAATGATSFALYALKKTDVVIDRKRNPEPWEMVDPTQPQ 60

Query: 278 KLITINQEWKPIEELE 325
           KLITINQ+WKP+EEL+
Sbjct: 61  KLITINQQWKPVEELQ 76